[CIG-MC] Citcom Installation

Lukas Fuchs lukas_fuchs84 at outlook.com
Thu Sep 29 15:01:44 PDT 2016

Dear CIG Team, 

I tried to install CitcomS on my local working machine (Fedora24). The
configuration seemed to be fine, however, make was not successful (see
config.log in the attachment) and I received the following error: 

make[3]: Entering directory '/home/staff/lfuchs/Numerics/CitcomS-
mpicc -DHAVE_CONFIG_H -I. -I..   -DUSE_GZDIR   -g -O2 -MT h5tocap.o -MD
-MP -MF .deps/h5tocap.Tpo -c -o h5tocap.o h5tocap.c
h5tocap.c: In function ‘main’:
h5tocap.c:74:9: warning: implicit declaration of function ‘strcmp’ [-
     if (strcmp(argv[1], "-h") == 0 || strcmp(argv[1], "--help") == 0)
In file included from /usr/include/openmpi-x86_64/H5public.h:34:0,
                 from /usr/include/openmpi-x86_64/hdf5.h:24,
                 from h5tocap.c:22:
/usr/include/openmpi-x86_64/H5version.h:285:17: error: too few
arguments to function ‘H5Gopen2’
 #define H5Gopen H5Gopen2
h5tocap.c:122:13: note: in expansion of macro ‘H5Gopen’
     input = H5Gopen(h5file, "input");
In file included from /usr/include/openmpi-x86_64/hdf5.h:31:0,
                 from h5tocap.c:22:
/usr/include/openmpi-x86_64/H5Gpublic.h:78:14: note: declared here
 H5_DLL hid_t H5Gopen2(hid_t loc_id, const char *name, hid_t gapl_id);
Makefile:615: recipe for target 'h5tocap.o' failed

Do you have any suggestions on how to solve this issue? 

Thanks in advance. 



Lukas Fuchs
3605 Steck Ave. #1104
Austin, TX 78759
Email: lukas_fuchs84 at outlook.com
Phone: +1 (512) 987-3427
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